Basic Information
Locus ID:
gene-QOZ80_2BG0196640
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 64290713 | 64291237 | - | gene-QOZ80_2BG0196640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 18,791.60 Da | 60.48 | 83.68 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 102 | 145 | 1.0817E-11 | - |
| Pfam | PF13639 | Ring finger domain | 101 | 145 | 7.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 101 | 151 | 2.17E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 96 | 148 | 7.0E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 102 | 144 | 2.7E-7 | IPR001841 |
| SMART | SM00744 | ringv_2 | 101 | 145 | 0.0053 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 102 | 145 | 12.666314 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 174 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35480.1 | RING-H2 finger A3B. Encodes a putative RING-H2 finger protein RHA3b. | 0 |
| RefSeq | NP_001137079.1 | uncharacterized LOC100217252 [Zea mays] | 0 |
| Q9ZT49 | Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UWQ2 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology