Basic Information
Locus ID:
gene-QOZ80_2BG0194560
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
UBA-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 62966211 | 62967928 | + | gene-QOZ80_2BG0194560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.10 | 59,891.16 Da | 59.28 | 63.24 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02958 | UAS | 264 | 377 | 3.50777E-32 | - |
| Pfam | PF14555 | UBA-like domain | 5 | 45 | 1.6E-11 | - |
| Pfam | PF13899 | Thioredoxin-like | 273 | 352 | 2.4E-6 | - |
| Pfam | PF00789 | UBX domain | 457 | 532 | 1.3E-4 | IPR001012 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 250 | 379 | 3.22E-23 | IPR036249 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 451 | 540 | 2.22E-8 | IPR029071 |
| SUPERFAMILY | SSF46934 | UBA-like | 5 | 44 | 8.16E-6 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 3 | 45 | 1.8E-8 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 267 | 381 | 1.2E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 400 | 541 | 5.2E-6 | - |
| SMART | SM00594 | 45neu3 | 252 | 375 | 1.7E-10 | IPR006577 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 457 | 540 | 13.189197 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 458 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004955104.1 | plant UBX domain-containing protein 7 [Setaria italica] | 0 |
| Q6P5G6 | UBX domain-containing protein 7 OS=Mus musculus OX=10090 GN=Ubxn7 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9V162 | UBX domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_20603 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.861, AH07.2773, BH03.985, BH07.2584, CH07.2650 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0138910, gene-QOZ80_2BG0194560 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0117420.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007415, gene-QYE76_023963, gene-QYE76_023966 ... |
| Poaceae | Oryza coarctata | 3 | Oco04G017190, Oco13G005150, Oco14G006110 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g42800.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G208100 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G013060, Chr09G024940, Chr09G024970, Chr15G015460 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG020080, gene_TRIDC6AG036470 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G133200.1.cds1, TraesCS2B02G156700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb185740_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-27667, nbis-gene-9357 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13983 |