Basic Information
Locus ID:
gene-QOZ80_2BG0193180
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Polyribonucleotide nucleotidyltransferase, RNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 62028456 | 62031409 | - | gene-QOZ80_2BG0193180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 56,643.05 Da | 45.09 | 68.81 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 57 | 498 | 9.16E-35 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 303 | 505 | 8.9E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 50 | 302 | 1.2E-15 | IPR015943 |
| SMART | SM00320 | WD40_4 | 206 | 245 | 1.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 316 | 354 | 66.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 127 | 167 | 55.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 256 | 296 | 27.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 470 | 504 | 56.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 372 | 412 | 4.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 51 | 89 | 2.1 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 29 | 505 | 2.3E-142 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 359 | 384 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 245 | 272 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 217 | 244 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 331 | 358 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 474 | 503 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 143 | 171 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 68 | 88 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 273 | 301 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 385 | 411 | 1.2E-107 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 114 | 142 | 1.2E-107 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_025799077.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Panicum hallii] | 0 |
| A2X2K3 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2S3GRC4 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Panicum hallii OX=206008 GN=PAHAL_1G308600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology