Basic Information
Locus ID:
gene-QOZ80_2BG0192870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 61744493 | 61750769 | - | gene-QOZ80_2BG0192870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 84,928.72 Da | 51.85 | 63.00 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 39 | 276 | 4.53E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 536 | 577 | 5.31E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 537 | 584 | 2.2E-11 | - |
| SMART | SM00384 | AT_hook_2 | 631 | 643 | 9.4 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 490 | 502 | 14.0 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 392 | 404 | 2.0 | IPR017956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 657 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 658 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 598 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 534 | - | - |
| Coils | Coil | Coil | 742 | 762 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_025804884.1 | ABC transporter F family member 4-like isoform X2 [Panicum hallii] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GR96 | Tudor domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G304900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology