Basic Information
Locus ID:
gene-QOZ80_2BG0189940
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 59841736 | 59842977 | - | gene-QOZ80_2BG0189940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 42,916.60 Da | 50.80 | 68.21 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 51 | 92 | 2.5E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 209 | 249 | 1.3E-8 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 46 | 94 | 4.58E-9 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 122 | 399 | 1.44E-29 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 46 | 102 | 1.2E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 114 | 332 | 3.5E-26 | IPR015915 |
| SMART | SM00612 | kelc_smart | 165 | 214 | 0.094 | IPR006652 |
| SMART | SM00612 | kelc_smart | 216 | 263 | 7.9E-7 | IPR006652 |
| SMART | SM00256 | fbox_2 | 53 | 93 | 5.8E-7 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_034596662.1 | F-box/kelch-repeat protein SKIP20-like [Setaria viridis] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | K3Z0B2 | F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology