Basic Information
Locus ID:
gene-QOZ80_2BG0185220
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 56050840 | 56052876 | + | gene-QOZ80_2BG0185220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 73,547.67 Da | 45.85 | 89.75 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 49 | 273 | 8.9038E-77 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 373 | 575 | 5.7E-37 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 48 | 278 | 5.4E-49 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 38 | 273 | 2.1E-50 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 636 | 3.14E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 447 | 5.3E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 641 | 1.3E-54 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 39 | 281 | 2.0E-55 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 643 | 32.385956 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 158 | 164 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_002451916.1 | L-type lectin-domain containing receptor kinase S.6 [Sorghum bicolor] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | C5XZK9 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3004G118800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology