Basic Information
Locus ID:
gene-QOZ80_2BG0184370
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 55195770 | 55197878 | - | gene-QOZ80_2BG0184370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 77,621.74 Da | 47.42 | 87.29 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 140 | 3.02161E-16 | IPR002083 |
| CDD | cd00121 | MATH | 367 | 493 | 3.29389E-12 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 168 | 282 | 1.10627E-43 | - |
| Pfam | PF00651 | BTB/POZ domain | 172 | 283 | 3.1E-24 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 526 | 646 | 5.3E-21 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 511 | 646 | 1.3E-24 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 365 | 497 | 7.68E-18 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 159 | 283 | 2.26E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 15 | 147 | 3.6E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 365 | 496 | 1.2E-12 | IPR008974 |
| Gene3D | G3DSA:6.10.250.3030 | - | 643 | 690 | 3.8E-12 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 287 | 356 | 2.2E-16 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 156 | 280 | 4.3E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 144 | 5.7E-14 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 507 | 642 | 2.6E-29 | IPR011333 |
| SMART | SM00225 | BTB_4 | 179 | 285 | 3.7E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 533 | 648 | 6.2E-22 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 16 | 140 | 12.106423 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 533 | 606 | 13.239526 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 365 | 493 | 11.109213 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 179 | 249 | 16.424553 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025876425.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC4348685 [Oryza sativa Japonica Group] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0M7U1 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_2AG0128750, gene-QOZ80_2AG0128780 ... |