HalophFGD

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Basic Information
Locus ID: gene-QOZ80_2BG0182310
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr2B 53119476 53120738 + gene-QOZ80_2BG0182310
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.57 37,398.21 Da 48.09 90.21 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08268 F-box associated domain 166 249 1.5E-5 IPR013187
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 134 256 1.9E-10 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025792056.1 uncharacterized protein LOC112873276 [Panicum hallii] 0
TrEMBL A0A835C831 F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_022148 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 4 BH01.3850, BH04.2111, CH01.4111, CH01.4112
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2BG0182310, gene-QOZ80_2BG0182320 ...
gene-QOZ80_3AG0249770, gene-QOZ80_3AG0250930, gene-QOZ80_3BG0278350, gene-QOZ80_3BG0278690, gene-QOZ80_UnG0726560
Poaceae Lolium multiflorum 6 gene-QYE76_018469, gene-QYE76_067676, gene-QYE76_067677 ...
gene-QYE76_067679, gene-QYE76_067680, gene-QYE76_068506
Poaceae Oryza coarctata 6 Oco05G014270, Oco06G011750, Oco06G012020, Oco06G012030 ...
Oco19G002880, Oco20G003720
Poaceae Oryza sativa 8 LOC_Os03g25190.1, LOC_Os03g25220.1, LOC_Os03g25240.1 ...
LOC_Os03g25250.1, LOC_Os03g25640.1, LOC_Os03g25650.1, LOC_Os03g26310.1, LOC_Os10g25660.1
Poaceae Thinopyrum elongatum 1 Tel4E01G485500
Poaceae Triticum aestivum 3 TraesCS2B02G217900.1.cds1, TraesCS4A02G013900.1.cds1 ...
TraesCS4D02G288900.1.cds1
Poaceae Zoysia japonica 3 nbis-gene-11989, nbis-gene-47249, nbis-gene-49948
Poaceae Zoysia macrostachya 3 Zma_g1101, Zma_g3492, Zma_g3565
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.