Basic Information
Locus ID:
gene-QOZ80_2BG0180900
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 50289532 | 50290588 | + | gene-QOZ80_2BG0180900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 35,327.97 Da | 47.70 | 91.58 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 133 | 1.96089E-15 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 167 | 276 | 5.3E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 24 | 142 | 6.38E-23 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 153 | 277 | 1.57E-29 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 273 | 320 | 3.0E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 151 | 272 | 6.1E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 89 | 145 | 5.7E-6 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 88 | 2.1E-10 | IPR008974 |
| SMART | SM00225 | BTB_4 | 175 | 278 | 4.0E-21 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 33 | 133 | 12.873508 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 175 | 243 | 16.714102 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037418503.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PUN1 | BTB/POZ and MATH domain-containing protein 1-like OS=Panicum miliaceum OX=4540 GN=C2845_PM16G00410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0125270, gene-QOZ80_2BG0180900 |