Basic Information
Locus ID:
gene-QOZ80_2BG0180870
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 50241418 | 50242172 | + | gene-QOZ80_2BG0180870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 22,121.21 Da | 44.44 | 90.10 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 11 | 39 | 1.10584E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 71 | 154 | 1.6E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 71 | 155 | 5.49E-17 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 10 | 49 | 1.64E-8 | - |
| Gene3D | G3DSA:6.10.250.3030 | - | 151 | 179 | 1.8E-7 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 67 | 150 | 3.3E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 37 | 155 | 6.3E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 37 | 120 | 9.268581 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_044393753.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A8XXL2 | Speckle-type POZ protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene-QOZ80_2BG0180870.