Basic Information
Locus ID:
gene-QOZ80_2BG0180820
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 50062972 | 50064147 | - | gene-QOZ80_2BG0180820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 42,825.11 Da | 50.64 | 74.91 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 340 | 381 | 4.64326E-10 | - |
| Pfam | PF13639 | Ring finger domain | 339 | 381 | 4.2E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 334 | 385 | 8.33E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 325 | 390 | 4.3E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 340 | 380 | 0.0054 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 340 | 381 | 11.707369 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 37 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039824240.1 | uncharacterized protein LOC120686137 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9UMC2 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27009 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology