Basic Information
Locus ID:
gene-QOZ80_2BG0180340
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 49410924 | 49412042 | - | gene-QOZ80_2BG0180340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 40,913.22 Da | 43.19 | 83.92 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 26 | 164 | 4.67738E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 198 | 307 | 4.2E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 24 | 172 | 1.39E-23 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 187 | 307 | 1.86E-28 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 182 | 304 | 5.3E-34 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 168 | 4.1E-20 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 308 | 372 | 1.6E-17 | - |
| SMART | SM00225 | BTB_4 | 206 | 309 | 3.7E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 206 | 274 | 15.969549 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 25 | 162 | 14.126414 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002464611.2 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835CCH3 | Speckle-type POZ protein-like protein OS=Digitaria exilis OX=1010633 GN=HU200_023794 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0124660, gene-QOZ80_2AG0124680 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G009310 |