Basic Information
Locus ID:
gene-QOZ80_2BG0180280
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 49278073 | 49279194 | - | gene-QOZ80_2BG0180280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 40,486.93 Da | 39.96 | 88.20 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 25 | 163 | 3.50031E-21 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 196 | 307 | 4.43734E-45 | - |
| Pfam | PF00917 | MATH domain | 47 | 145 | 2.3E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 199 | 308 | 1.2E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 186 | 310 | 3.14E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 23 | 173 | 1.19E-27 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 182 | 305 | 2.4E-37 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 24 | 167 | 3.5E-24 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 309 | 373 | 1.2E-17 | - |
| SMART | SM00225 | BTB_4 | 207 | 310 | 5.2E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 207 | 275 | 17.437971 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 24 | 163 | 19.342592 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002464611.2 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1B6QKS6 | BTB domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G246800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0124660, gene-QOZ80_2AG0124680 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G009310 |