Basic Information
Locus ID:
gene-QOZ80_2BG0174840
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 28793586 | 28794436 | - | gene-QOZ80_2BG0174840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 24,793.72 Da | 51.84 | 73.02 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 33 | 188 | 5.09742E-63 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 69 | 187 | 6.2E-39 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 38 | 190 | 5.3E-53 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 11 | 198 | 4.6E-59 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 190 | 33.765976 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 132 | 149 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10590.1 | ubiquitin-specific protease 10. encodes a member of the ubiquitin-specific protease family, UBP10 | 0 |
| RefSeq | XP_025792927.1 | ubiquitin carboxyl-terminal hydrolase 9-like [Panicum hallii] | 0 |
| Q93Y01 | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana OX=3702 GN=UBP9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D6KC65 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d030357 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology