Basic Information
Locus ID:
gene-QOZ80_2BG0172800
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 18026168 | 18027695 | + | gene-QOZ80_2BG0172800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 45,099.71 Da | 65.79 | 97.02 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 57 | 92 | 3.5E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 49 | 98 | 2.75E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 45 | 95 | 3.1E-5 | - |
| SMART | SM00256 | fbox_2 | 59 | 99 | 0.0046 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 53 | 99 | 8.517177 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_014758656.1 | uncharacterized protein LOC100831682 [Brachypodium distachyon] | 0 |
| TrEMBL | A0A5J9V691 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_23149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2718, CH01.3268 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2BG0172800 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_011763 |