Basic Information
Locus ID:
gene-QOZ80_2BG0169630
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 12862678 | 12866934 | - | gene-QOZ80_2BG0169630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 98,932.53 Da | 47.90 | 81.46 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 38 | 199 | 2.55325E-37 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 819 | 860 | 3.25997E-22 | - |
| Pfam | PF04564 | U-box domain | 816 | 885 | 2.7E-18 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 532 | 733 | 8.6E-43 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 810 | 884 | 1.68E-23 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 49 | 165 | 4.6E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 508 | 792 | 2.16E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 814 | 886 | 1.6E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 508 | 601 | 1.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 602 | 801 | 1.5E-45 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 37 | 197 | 7.3E-6 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 818 | 881 | 9.9E-27 | IPR003613 |
| SMART | SM00220 | serkin_6 | 529 | 790 | 3.4E-31 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 814 | 886 | 34.588451 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 529 | 796 | 33.983097 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 647 | 659 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 535 | 556 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 324 | - | - |
| Coils | Coil | Coil | 405 | 439 | - | - |
| Coils | Coil | Coil | 112 | 132 | - | - |
| Coils | Coil | Coil | 447 | 467 | - | - |
| Coils | Coil | Coil | 475 | 502 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_004986828.1 | U-box domain-containing protein 33 isoform X1 [Setaria italica] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9SVC5 | E3 ubiquitin ligase OS=Eragrostis curvula OX=38414 GN=EJB05_51563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology