Basic Information
Locus ID:
gene-QOZ80_2BG0166820
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Variant SH3 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 10434580 | 10437760 | - | gene-QOZ80_2BG0166820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 41,272.44 Da | 39.76 | 79.41 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 308 | 356 | 4.2E-10 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 261 | 358 | 3.81E-17 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 45 | 256 | 1.21E-24 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 43 | 265 | 1.3E-10 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 304 | 358 | 6.4E-17 | - |
| SMART | SM00326 | SH3_2 | 304 | 359 | 1.6E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 301 | 360 | 21.304316 | IPR001452 |
| Coils | Coil | Coil | 242 | 262 | - | - |
| Coils | Coil | Coil | 184 | 211 | - | - |
| Coils | Coil | Coil | 147 | 174 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | NP_001347066.1 | SH3 domain-containing protein 2 [Zea mays] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835APY1 | SH3 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_022500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology