Basic Information
Locus ID:
gene-QOZ80_2BG0164290
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 8607630 | 8612725 | - | gene-QOZ80_2BG0164290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 50,636.58 Da | 39.22 | 82.55 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 4 | 126 | 1.35334E-30 | IPR002083 |
| Pfam | PF00917 | MATH domain | 16 | 128 | 3.2E-8 | IPR002083 |
| Pfam | PF00125 | Core histone H2A/H2B/H3/H4 | 348 | 444 | 4.2E-36 | IPR007125 |
| Pfam | PF00651 | BTB/POZ domain | 168 | 266 | 2.4E-18 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 145 | 266 | 8.97E-22 | IPR011333 |
| SUPERFAMILY | SSF47113 | Histone-fold | 339 | 445 | 1.43E-38 | IPR009072 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 4 | 138 | 2.45E-39 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 266 | 335 | 7.8E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 141 | 262 | 4.5E-27 | IPR011333 |
| Gene3D | G3DSA:1.10.20.10 | Histone, subunit A | 336 | 448 | 8.4E-51 | IPR009072 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 2 | 133 | 3.5E-35 | IPR008974 |
| SMART | SM00061 | math_3 | 3 | 111 | 4.4E-8 | IPR002083 |
| SMART | SM00225 | BTB_4 | 166 | 267 | 3.4E-17 | IPR000210 |
| SMART | SM00428 | h35 | 350 | 448 | 2.4E-58 | IPR000164 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1 | 128 | 21.337013 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 166 | 236 | 11.171326 | IPR000210 |
| ProSitePatterns | PS00959 | Histone H3 signature 2. | 379 | 387 | - | IPR000164 |
| PRINTS | PR00622 | Histone H3 signature | 392 | 410 | 4.2E-42 | IPR000164 |
| PRINTS | PR00622 | Histone H3 signature | 410 | 426 | 4.2E-42 | IPR000164 |
| PRINTS | PR00622 | Histone H3 signature | 333 | 347 | 4.2E-42 | IPR000164 |
| PRINTS | PR00622 | Histone H3 signature | 370 | 387 | 4.2E-42 | IPR000164 |
| PRINTS | PR00622 | Histone H3 signature | 426 | 447 | 4.2E-42 | IPR000164 |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_015624970.2 | BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5X1L7 | Speckle-type POZ protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0013g34930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0110870, gene-QOZ80_2BG0164290 ... |
| Poaceae | Hordeum vulgare | 13 | HORVU.MOREX.r3.5HG0427590.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 12 | gene-QYE76_009241, gene-QYE76_009243, gene-QYE76_016733 ... |
| Poaceae | Oryza coarctata | 1 | Oco04G008990 |
| Poaceae | Oryza sativa | 6 | LOC_Os02g20590.1, LOC_Os02g20600.1, LOC_Os02g20620.1 ... |
| Poaceae | Puccinellia tenuiflora | 11 | Pt_Chr0103080, Pt_Chr0103081, Pt_Chr0104126, Pt_Chr0104129 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G001120, Chr09G001130 |
| Poaceae | Thinopyrum elongatum | 16 | Tel1E01G144500, Tel1E01G145100, Tel1E01G145300 ... |
| Poaceae | Triticum dicoccoides | 21 | gene_TRIDC1AG009740, gene_TRIDC1AG009770 ... |
| Poaceae | Triticum aestivum | 51 | TraesCS1A02G070700.1.cds1, TraesCS1A02G070800.1.cds1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34043 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21999 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.1995_chr01_- |