HalophFGD

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Basic Information
Locus ID: gene-QOZ80_2BG0164290
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Speckle-type POZ protein-like protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr2B 8607630 8612725 - gene-QOZ80_2BG0164290
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.63 50,636.58 Da 39.22 82.55 -0.36
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 4 126 1.35334E-30 IPR002083
Pfam PF00917 MATH domain 16 128 3.2E-8 IPR002083
Pfam PF00125 Core histone H2A/H2B/H3/H4 348 444 4.2E-36 IPR007125
Pfam PF00651 BTB/POZ domain 168 266 2.4E-18 IPR000210
SUPERFAMILY SSF54695 POZ domain 145 266 8.97E-22 IPR011333
SUPERFAMILY SSF47113 Histone-fold 339 445 1.43E-38 IPR009072
SUPERFAMILY SSF49599 TRAF domain-like 4 138 2.45E-39 -
Gene3D G3DSA:1.25.40.420 - 266 335 7.8E-18 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 141 262 4.5E-27 IPR011333
Gene3D G3DSA:1.10.20.10 Histone, subunit A 336 448 8.4E-51 IPR009072
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 2 133 3.5E-35 IPR008974
SMART SM00061 math_3 3 111 4.4E-8 IPR002083
SMART SM00225 BTB_4 166 267 3.4E-17 IPR000210
SMART SM00428 h35 350 448 2.4E-58 IPR000164
ProSiteProfiles PS50144 MATH/TRAF domain profile. 1 128 21.337013 IPR002083
ProSiteProfiles PS50097 BTB domain profile. 166 236 11.171326 IPR000210
ProSitePatterns PS00959 Histone H3 signature 2. 379 387 - IPR000164
PRINTS PR00622 Histone H3 signature 392 410 4.2E-42 IPR000164
PRINTS PR00622 Histone H3 signature 410 426 4.2E-42 IPR000164
PRINTS PR00622 Histone H3 signature 333 347 4.2E-42 IPR000164
PRINTS PR00622 Histone H3 signature 370 387 4.2E-42 IPR000164
PRINTS PR00622 Histone H3 signature 426 447 4.2E-42 IPR000164
Gene Ontology
Molecular Function:
GO:0003677 (DNA binding) GO:0005515 (protein binding) GO:0046982 (protein heterodimerization activity)
Cellular Component:
GO:0000786 (nucleosome)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_015624970.2 BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A8J5X1L7 Speckle-type POZ protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0013g34930 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_2AG0110870, gene-QOZ80_2BG0164290 ...
gene-QOZ80_2BG0164320
Poaceae Hordeum vulgare 13 HORVU.MOREX.r3.5HG0427590.1.CDS1 ...
HORVU.MOREX.r3.5HG0427600.1.CDS1, HORVU.MOREX.r3.5HG0429960.1.CDS1, HORVU.MOREX.r3.5HG0518270.1.CDS1, HORVU.MOREX.r3.5HG0518280.1.CDS1, HORVU.MOREX.r3.5HG0518360.1.CDS1, HORVU.MOREX.r3.5HG0518370.1.CDS1, HORVU.MOREX.r3.5HG0518380.1.CDS1, HORVU.MOREX.r3.5HG0518390.1.CDS1, HORVU.MOREX.r3.5HG0518410.1.CDS1, HORVU.MOREX.r3.5HG0518450.1.CDS1, HORVU.MOREX.r3.5HG0518460.1.CDS1, HORVU.MOREX.r3.5HG0518500.1.CDS1
Poaceae Lolium multiflorum 12 gene-QYE76_009241, gene-QYE76_009243, gene-QYE76_016733 ...
gene-QYE76_016734, gene-QYE76_028417, gene-QYE76_061234, gene-QYE76_061235, gene-QYE76_061248, gene-QYE76_064568, gene-QYE76_064569, gene-QYE76_071491, gene-QYE76_071492
Poaceae Oryza coarctata 1 Oco04G008990
Poaceae Oryza sativa 6 LOC_Os02g20590.1, LOC_Os02g20600.1, LOC_Os02g20620.1 ...
LOC_Os02g20690.1, LOC_Os02g20720.1, LOC_Os10g29460.1
Poaceae Puccinellia tenuiflora 11 Pt_Chr0103080, Pt_Chr0103081, Pt_Chr0104126, Pt_Chr0104129 ...
Pt_Chr0105447, Pt_Chr0402069, Pt_Chr0500238, Pt_Chr0500240, Pt_Chr0500246, Pt_Chr0500632, Pt_Chr0500635
Poaceae Sporobolus alterniflorus 2 Chr09G001120, Chr09G001130
Poaceae Thinopyrum elongatum 16 Tel1E01G144500, Tel1E01G145100, Tel1E01G145300 ...
Tel2E01G982800, Tel4E01G649300, Tel5E01G088500, Tel5E01G088600, Tel5E01G108500, Tel5E01G109100, Tel5E01G681300, Tel5E01G681400, Tel5E01G681500, Tel5E01G682000, Tel5E01G682200, Tel5E01G682600, Tel6E01G719300
Poaceae Triticum dicoccoides 21 gene_TRIDC1AG009740, gene_TRIDC1AG009770 ...
gene_TRIDC1AG009780, gene_TRIDC1AG064490, gene_TRIDC1BG012680, gene_TRIDC2AG079210, gene_TRIDC2BG080030, gene_TRIDC4AG065610, gene_TRIDC5AG005580, gene_TRIDC5AG007300, gene_TRIDC5AG007350, gene_TRIDC5AG062580, gene_TRIDC5BG006060, gene_TRIDC5BG008760, gene_TRIDC5BG066970, gene_TRIDC5BG066980, gene_TRIDC5BG066990, gene_TRIDC5BG067000, gene_TRIDC5BG067010, gene_TRIDC5BG067020, gene_TRIDC7BG004270
Poaceae Triticum aestivum 51 TraesCS1A02G070700.1.cds1, TraesCS1A02G070800.1.cds1 ...
TraesCS1A02G071000.1.cds1, TraesCS1A02G380800.1.cds1, TraesCS1B02G089500.1, TraesCS1D02G073200.1.cds1, TraesCS1D02G073400.1.cds1, TraesCS1D02G449100.1.cds1, TraesCS2D02G597100.1, TraesCS5A02G035800.1.cds1, TraesCS5A02G035900.1.cds1, TraesCS5A02G047500.1.cds1, TraesCS5A02G047800.1.cds1, TraesCS5A02G434800.1, TraesCS5A02G434900.1.cds1, TraesCS5A02G435000.1.cds1, TraesCS5A02G435100.1.cds1, TraesCS5A02G435200.1.cds1, TraesCS5A02G435300.1.cds1, TraesCS5B02G036300.1, TraesCS5B02G036500.1.cds1, TraesCS5B02G052400.1.cds1, TraesCS5B02G437600.1.cds1, TraesCS5B02G437700.1.cds1, TraesCS5B02G437800.1.cds1, TraesCS5B02G437900.1.cds1, TraesCS5B02G438000.1.cds1, TraesCS5B02G438100.1.cds1, TraesCS5B02G438300.1, TraesCS5B02G438400.1.cds1, TraesCS5B02G438500.1.cds1, TraesCS5B02G438600.1.cds1, TraesCS5D02G043800.1.cds1, TraesCS5D02G043900.1.cds1, TraesCS5D02G044000.1.cds1, TraesCS5D02G058100.1.cds1, TraesCS5D02G442400.1.cds1, TraesCS5D02G442500.1.cds1, TraesCS5D02G442600.1.cds1, TraesCS5D02G442700.1.cds1, TraesCS5D02G442800.1.cds1, TraesCS5D02G442900.1.cds1, TraesCS5D02G443100.1.cds1, TraesCS6A02G398300.1.cds1, TraesCS6D02G382500.1.cds1, TraesCS7A02G112400.1.cds1, TraesCS7B02G027800.1.cds1, TraesCS7D02G126600.1.cds1, TraesCS7D02G126700.1.cds1, TraesCSU02G003100.1.cds1, TraesCSU02G188900.1.cds1
Poaceae Zoysia japonica 1 nbis-gene-34043
Poaceae Zoysia macrostachya 1 Zma_g21999
Tamaricaceae Reaumuria soongarica 1 STRG.1995_chr01_-
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