Basic Information
Locus ID:
gene-QOZ80_2BG0164000
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 8428510 | 8430471 | - | gene-QOZ80_2BG0164000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 74,593.37 Da | 36.46 | 93.55 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 48 | 310 | 9.30437E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 45 | 306 | 2.4E-42 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 377 | 598 | 5.0E-26 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 374 | 605 | 4.59E-42 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 318 | 3.51E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 418 | 2.0E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 18 | 115 | 5.9E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 328 | 2.1E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 611 | 1.5E-30 | - |
| SMART | SM00220 | serkin_6 | 352 | 601 | 1.5E-9 | IPR000719 |
| SMART | SM00220 | serkin_6 | 42 | 307 | 2.6E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 610 | 22.859638 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 310 | 34.20924 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 48 | 71 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 462 | 474 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_052161213.1 | wall-associated receptor kinase-like 4 isoform X1 [Oryza glaberrima] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811RFQ8 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS51984 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0110530, gene-QOZ80_2AG0110540 ... |
| Poaceae | Oryza coarctata | 1 | Oco14G008210 |
| Poaceae | Oryza sativa | 4 | LOC_Os07g31130.1, LOC_Os07g31190.1, LOC_Os07g31210.1 ... |