Basic Information
Locus ID:
gene-QOZ80_2BG0162790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 7488762 | 7490057 | - | gene-QOZ80_2BG0162790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 48,549.70 Da | 65.81 | 82.34 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 31 | 66 | 2.6E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 26 | 87 | 2.62E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 24 | 75 | 4.2E-5 | - |
| SMART | SM00256 | fbox_2 | 34 | 75 | 7.9E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 28 | 75 | 10.848683 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002442530.1 | uncharacterized protein LOC8084401 [Sorghum bicolor] | 0 |
| TrEMBL | A0A835EXW2 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_022915 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH07.1207, BH07.1289, CH07.1242 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2BG0162790 |