Basic Information
Locus ID:
gene-QOZ80_2BG0162580
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 7321695 | 7326256 | - | gene-QOZ80_2BG0162580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 82,606.82 Da | 47.97 | 66.49 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18718 | PIN_PRORP | 558 | 681 | 5.673E-45 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 179 | 240 | 1.3E-17 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 500 | 726 | 4.4E-71 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 314 | 458 | 4.9E-47 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 518 | 692 | 3.7E-185 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 311 | 729 | 3.7E-185 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 372 | 406 | 9.985802 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 147 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_025801517.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Panicum hallii] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V977 | ribonuclease P OS=Eragrostis curvula OX=38414 GN=EJB05_24341 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology