Basic Information
Locus ID:
gene-QOZ80_2BG0162070
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 6896288 | 6897404 | + | gene-QOZ80_2BG0162070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 38,265.39 Da | 41.48 | 95.73 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 60 | 5.9E-8 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 54 | 331 | 7.45E-8 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 76 | 2.62E-15 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 24 | 61 | 1.7E-8 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 114 | 334 | 3.0E-7 | IPR015915 |
| SMART | SM00256 | fbox_2 | 25 | 65 | 1.3E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 162 | 334 | 1.3E-17 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 19 | 65 | 10.716211 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27520.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_002461646.1 | F-box/kelch-repeat protein At4g19930 [Sorghum bicolor] | 0 |
| Q9ZNQ3 | F-box/LRR-repeat/kelch-repeat protein At2g27520 OS=Arabidopsis thaliana OX=3702 GN=At2g27520 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SWD5 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_51167 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology