Basic Information
Locus ID:
gene-QOZ80_2BG0159230
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Galactose oxidase, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 4802321 | 4803439 | - | gene-QOZ80_2BG0159230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 39,712.68 Da | 54.93 | 73.52 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 37 | 3.1E-5 | IPR001810 |
| Pfam | PF13415 | Galactose oxidase, central domain | 123 | 168 | 5.4E-7 | - |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 361 | 2.88E-35 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 51 | 1.2E-5 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 72 | 366 | 5.7E-33 | IPR015915 |
| SMART | SM00612 | kelc_smart | 175 | 222 | 0.084 | IPR006652 |
| SMART | SM00612 | kelc_smart | 123 | 171 | 1.7E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_039788725.1 | F-box/kelch-repeat protein At1g80440-like [Panicum virgatum] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7F3H9 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G081400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology