Basic Information
Locus ID:
gene-QOZ80_2BG0158800
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 4497634 | 4499709 | - | gene-QOZ80_2BG0158800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 68,481.84 Da | 44.41 | 105.85 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 379 | 401 | 0.86 | IPR001611 |
| Pfam | PF00646 | F-box domain | 63 | 103 | 5.2E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 221 | 244 | 0.0065 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 99 | 1.57E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 345 | 608 | 8.04E-40 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 149 | 412 | 7.85E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 57 | 250 | 2.8E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 561 | 649 | 6.5E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 350 | 560 | 6.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 251 | 338 | 3.6E-9 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 247 | 272 | 0.23 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 565 | 589 | 3.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 221 | 246 | 1.4E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 591 | 616 | 520.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 405 | 430 | 540.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 273 | 298 | 0.26 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 195 | 220 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 459 | 484 | 36.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 353 | 378 | 26.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 539 | 564 | 0.0011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 379 | 404 | 0.0039 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 512 | 537 | 2.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 166 | 194 | 380.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 485 | 510 | 0.094 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_025798413.1 | EIN3-binding F-box protein 2-like [Panicum hallii] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VDN1 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_24727 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology