Basic Information
Locus ID:
gene-QOZ80_2BG0158300
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 4216765 | 4222476 | + | gene-QOZ80_2BG0158300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 69,677.12 Da | 49.41 | 93.71 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 97 | 112 | 0.7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 402 | 576 | 4.0E-16 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 202 | 2.4E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 250 | 2.32E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 581 | 1.54E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 325 | 393 | 7.5E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 394 | 602 | 3.4E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 324 | 6.8E-47 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 190 | 216 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 124 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 2.7 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 144 | 165 | 7.488635 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 586 | 20.061106 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 342 | 364 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021313914.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Sorghum bicolor] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7F348 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G069900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology