Basic Information
Locus ID:
gene-QOZ80_2BG0157860
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 3933289 | 3938814 | + | gene-QOZ80_2BG0157860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 77,982.75 Da | 42.09 | 89.47 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 414 | 685 | 1.11663E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 412 | 682 | 3.5E-44 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 94 | 110 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 2.0E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 682 | 2.91E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 246 | 2.3E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 485 | 4.9E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 486 | 705 | 5.8E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 253 | 6.6E-51 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 92 | 120 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 161 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 162 | 186 | 52.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 408 | 685 | 37.813408 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 95 | 108 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 138 | 151 | 1.5E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 285 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_039788537.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Panicum virgatum] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811PPI9 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS31941 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology