Basic Information
Locus ID:
gene-QOZ80_2BG0157640
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 3675593 | 3678478 | - | gene-QOZ80_2BG0157640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 74,274.79 Da | 38.56 | 90.95 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 297 | 593 | 4.47407E-154 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 1 | 275 | 2.0711E-144 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 300 | 589 | 8.9E-21 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 293 | 594 | 4.97E-45 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 12 | 274 | 9.94E-30 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 9 | 275 | 2.2E-25 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 294 | 594 | 5.0E-45 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 1 | 276 | 18.324694 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 295 | 594 | 27.297405 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58170.1 | SHV3-like 5. | 0 |
| RefSeq | XP_025809767.1 | glycerophosphodiester phosphodiesterase GDPDL7-like isoform X1 [Panicum hallii] | 0 |
| Q9LVN0 | Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 GN=GDPDL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SLZ2 | glycerophosphodiester phosphodiesterase OS=Eragrostis curvula OX=38414 GN=EJB05_54523 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology