Basic Information
Locus ID:
gene-QOZ80_2BG0156940
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 3247773 | 3248357 | - | gene-QOZ80_2BG0156940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.84 | 20,110.04 Da | 73.82 | 86.39 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 144 | 186 | 1.6E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 143 | 190 | 3.14E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 102 | 191 | 3.8E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 144 | 185 | 3.7E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 144 | 186 | 12.164712 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 34 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35480.1 | RING-H2 finger A3B. Encodes a putative RING-H2 finger protein RHA3b. | 0 |
| RefSeq | XP_004951705.1 | RING-H2 finger protein ATL56 [Setaria italica] | 0 |
| Q9ZT49 | Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9STY2 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52109 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology