Basic Information
Locus ID:
gene-QOZ80_2BG0152720
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 558084 | 561347 | + | gene-QOZ80_2BG0152720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 117,643.96 Da | 41.61 | 93.92 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 792 | 1071 | 2.06024E-93 | - |
| Pfam | PF13855 | Leucine rich repeat | 343 | 403 | 3.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 69 | 2.9E-4 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 608 | 622 | 1.9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 787 | 1066 | 3.1E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 448 | 507 | 1.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 194 | 666 | 5.7E-68 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 259 | 1.34E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 773 | 1068 | 9.57E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 871 | 1084 | 5.1E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 307 | 438 | 5.2E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 748 | 870 | 2.1E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 565 | 676 | 2.9E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 439 | 536 | 9.9E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 306 | 5.9E-60 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 391 | 414 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 244 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 143 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 119 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 494 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 607 | 631 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 417 | 444 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 268 | 291 | 21.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 786 | 1068 | 1.1E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 342 | 369 | 290.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 786 | 1071 | 37.163246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 916 | 928 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 792 | 814 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02220.1 | phytosulfokin receptor 1. Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). | 0 |
| RefSeq | XP_004952165.1 | phytosulfokine receptor 1 [Setaria italica] | 0 |
| Q9ZVR7 | Phytosulfokine receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSKR1 PE=1 SV=4 | 0 | |
| TrEMBL | K3YPH5 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101778686 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0099290, gene-QOZ80_2BG0152720 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0546030.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_019570, gene-QYE76_019571 |
| Poaceae | Oryza coarctata | 2 | Oco03G000770, Oco04G000710 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g02490.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G012100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201128 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G117700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG005390, gene_TRIDC6BG007810 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G044700.1.cds1, TraesCS6B02G061000.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb229960_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52092 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12066 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g21260 |