Basic Information
Locus ID:
gene-QOZ80_2BG0152490
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 389568 | 390794 | + | gene-QOZ80_2BG0152490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 46,961.31 Da | 44.16 | 79.53 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 21 | 58 | 2.6E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 100 | 3.14E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 58 | 8.2E-8 | - |
| SMART | SM00256 | fbox_2 | 19 | 59 | 1.1E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 128 | 336 | 1.1E-19 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 59 | 8.967582 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044409933.1 | putative F-box protein At2g02030 [Triticum aestivum] | 0 |
| Q9LPW2 | Putative F-box/kelch-repeat protein At1g12870 OS=Arabidopsis thaliana OX=3702 GN=At1g12870 PE=4 SV=2 | 0 | |
| TrEMBL | A0A0A8XRM8 | F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology