Basic Information
Locus ID:
gene-QOZ80_2AG0140160
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 53397100 | 53400980 | + | gene-QOZ80_2AG0140160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 90,601.17 Da | 48.79 | 83.89 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 45 | 199 | 6.83083E-39 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 740 | 781 | 5.94155E-23 | - |
| Pfam | PF04564 | U-box domain | 737 | 805 | 3.2E-14 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 447 | 679 | 9.8E-41 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 731 | 804 | 4.41E-22 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 54 | 163 | 4.6E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 420 | 702 | 1.12E-65 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 43 | 172 | 6.5E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 424 | 516 | 2.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 517 | 719 | 7.7E-47 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 735 | 811 | 3.0E-27 | IPR013083 |
| SMART | SM00220 | serkin_6 | 444 | 713 | 1.9E-25 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 739 | 802 | 1.5E-28 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 735 | 809 | 35.013046 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 444 | 713 | 35.283424 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 562 | 574 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 450 | 471 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 259 | - | - |
| Coils | Coil | Coil | 324 | 358 | - | - |
| Coils | Coil | Coil | 387 | 414 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_039853488.1 | U-box domain-containing protein 33-like [Panicum virgatum] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UZR7 | RING-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_20324 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology