Basic Information
Locus ID:
gene-QOZ80_2AG0138910
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
UBA-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 52552278 | 52553999 | + | gene-QOZ80_2AG0138910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.13 | 63,286.54 Da | 59.76 | 62.98 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02958 | UAS | 293 | 406 | 1.13322E-32 | - |
| Pfam | PF00789 | UBX domain | 487 | 562 | 2.5E-4 | IPR001012 |
| Pfam | PF13899 | Thioredoxin-like | 302 | 381 | 1.6E-6 | - |
| Pfam | PF14555 | UBA-like domain | 4 | 42 | 2.0E-9 | - |
| SUPERFAMILY | SSF46934 | UBA-like | 4 | 41 | 1.91E-5 | IPR009060 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 279 | 409 | 3.79E-23 | IPR036249 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 454 | 570 | 1.11E-8 | IPR029071 |
| Gene3D | G3DSA:1.10.8.10 | - | 2 | 43 | 9.4E-8 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 433 | 571 | 8.2E-7 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 296 | 410 | 8.0E-23 | - |
| SMART | SM00594 | 45neu3 | 281 | 404 | 6.2E-12 | IPR006577 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 487 | 570 | 13.364729 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 218 | - | - |
| Coils | Coil | Coil | 213 | 233 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004955104.1 | plant UBX domain-containing protein 7 [Setaria italica] | 0 |
| O94888 | UBX domain-containing protein 7 OS=Homo sapiens OX=9606 GN=UBXN7 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9V162 | UBX domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_20603 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.861, AH07.2773, BH03.985, BH07.2584, CH07.2650 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0138910, gene-QOZ80_2BG0194560 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0117420.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_007415, gene-QYE76_023963, gene-QYE76_023966 ... |
| Poaceae | Oryza coarctata | 3 | Oco04G017190, Oco13G005150, Oco14G006110 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g42800.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G208100 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G013060, Chr09G024940, Chr09G024970, Chr15G015460 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2BG020080, gene_TRIDC6AG036470 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G133200.1.cds1, TraesCS2B02G156700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb185740_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-27667, nbis-gene-9357 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13983 |