Basic Information
Locus ID:
gene-QOZ80_2AG0137270
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 51274683 | 51280906 | - | gene-QOZ80_2AG0137270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 85,235.07 Da | 51.59 | 63.67 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 40 | 288 | 7.82E-8 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 540 | 581 | 5.31E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 541 | 588 | 2.2E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 662 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 781 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 308 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
| Coils | Coil | Coil | 455 | 475 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_025804884.1 | ABC transporter F family member 4-like isoform X2 [Panicum hallii] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GR96 | Tudor domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G304900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology