Basic Information
Locus ID:
gene-QOZ80_2AG0135820
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 50275245 | 50277951 | - | gene-QOZ80_2AG0135820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 47,437.69 Da | 43.01 | 72.15 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 224 | 304 | 7.1E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 376 | 411 | 9.0E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 143 | 412 | 4.49E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 118 | 415 | 2.9E-111 | IPR015943 |
| SMART | SM00320 | WD40_4 | 242 | 281 | 8.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 329 | 369 | 86.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 201 | 238 | 0.44 | IPR001680 |
| SMART | SM00320 | WD40_4 | 157 | 198 | 0.011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 284 | 326 | 6.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 372 | 411 | 1.7E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 379 | 412 | 12.981398 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 166 | 207 | 9.706414 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 249 | 281 | 9.599237 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 379 | 412 | 10.785595 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 249 | 281 | 11.477578 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 398 | 412 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_025793598.1 | protein FIZZY-RELATED 2-like [Panicum hallii] | 0 |
| Q8L3Z8 | Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=FZR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V269 | WD_REPEATS_REGION domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_21057 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology