Basic Information
Locus ID:
gene-QOZ80_2AG0134410
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 49290967 | 49292190 | + | gene-QOZ80_2AG0134410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 42,682.32 Da | 49.73 | 69.41 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 50 | 91 | 4.6E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 201 | 246 | 2.9E-9 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 112 | 366 | 1.96E-27 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 45 | 93 | 5.1E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 46 | 101 | 2.9E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 102 | 328 | 3.4E-25 | IPR015915 |
| SMART | SM00256 | fbox_2 | 52 | 92 | 1.9E-6 | IPR001810 |
| SMART | SM00612 | kelc_smart | 213 | 260 | 2.1E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 163 | 211 | 0.65 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_025794959.1 | F-box/kelch-repeat protein SKIP20-like [Panicum hallii] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | K3Z0B2 | F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology