Basic Information
Locus ID:
gene-QOZ80_2AG0130030
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 45275050 | 45277089 | + | gene-QOZ80_2AG0130030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 73,577.56 Da | 44.57 | 89.48 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 50 | 274 | 1.71088E-77 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 374 | 633 | 1.1E-38 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 50 | 279 | 6.2E-50 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 670 | 3.55E-70 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 39 | 274 | 9.79E-51 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 37 | 282 | 4.9E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 644 | 6.0E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 448 | 2.6E-17 | - |
| SMART | SM00220 | serkin_6 | 372 | 644 | 1.4E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 644 | 32.739304 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 159 | 165 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 493 | 505 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_002451916.1 | L-type lectin-domain containing receptor kinase S.6 [Sorghum bicolor] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | C5XZK9 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3004G118800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology