Basic Information
Locus ID:
gene-QOZ80_2AG0128790
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 44218853 | 44219883 | + | gene-QOZ80_2AG0128790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 34,497.14 Da | 53.88 | 86.64 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 112 | 1.20824E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 143 | 261 | 5.6E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 129 | 261 | 1.69E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 17 | 120 | 3.92E-9 | - |
| Gene3D | G3DSA:6.10.250.3030 | - | 258 | 305 | 1.3E-11 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 126 | 257 | 2.1E-31 | IPR011333 |
| SMART | SM00225 | BTB_4 | 150 | 263 | 1.3E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 150 | 223 | 13.384299 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025791642.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0MIW3 | BTB domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG263200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_2AG0128750, gene-QOZ80_2AG0128780 ... |