Basic Information
Locus ID:
gene-QOZ80_2AG0125950
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PPR repeat family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 40142811 | 40144343 | - | gene-QOZ80_2AG0125950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 37,788.03 Da | 30.30 | 93.69 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 73 | 342 | 4.0E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 50 | 341 | 6.23E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 151 | 350 | 3.8E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 32 | 148 | 1.2E-25 | - |
| PIRSF | PIRSF000654 | ILK | 38 | 349 | 1.3E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 350 | 30.053843 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 74 | 96 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 203 | 215 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039819345.1 | PTI1-like tyrosine-protein kinase 1 [Panicum virgatum] | 0 |
| Q8H1G6 | PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PTI11 PE=1 SV=1 | 0 | |
| TrEMBL | C5YBC5 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3006G130000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0125950, gene-QOZ80_2BG0181770 |