Basic Information
Locus ID:
gene-QOZ80_2AG0125190
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 38995000 | 38996020 | + | gene-QOZ80_2AG0125190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 32,909.46 Da | 46.99 | 87.34 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 8 | 131 | 1.09445E-26 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 142 | 223 | 6.4E-11 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 6 | 131 | 4.41E-30 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 142 | 224 | 5.89E-14 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 6 | 134 | 1.4E-24 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 227 | 289 | 5.1E-14 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 136 | 226 | 1.1E-16 | IPR011333 |
| SMART | SM00225 | BTB_4 | 126 | 225 | 6.9E-7 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 7 | 135 | 14.970208 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025791694.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6QH08 | Speckle-type POZ protein OS=Panicum miliaceum OX=4540 GN=C2845_PM12G14650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0125190, gene-QOZ80_2BG0180840 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G009600 |