Basic Information
Locus ID:
gene-QOZ80_2AG0120360
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 24400569 | 24401425 | - | gene-QOZ80_2AG0120360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 24,799.73 Da | 54.82 | 72.12 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 33 | 188 | 2.95781E-63 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 69 | 187 | 7.7E-38 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 38 | 190 | 6.67E-53 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 11 | 198 | 1.7E-58 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 190 | 33.35112 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 132 | 149 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10590.1 | ubiquitin-specific protease 10. encodes a member of the ubiquitin-specific protease family, UBP10 | 0 |
| RefSeq | XP_025792927.1 | ubiquitin carboxyl-terminal hydrolase 9-like [Panicum hallii] | 0 |
| Q93Y01 | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana OX=3702 GN=UBP9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D6KC65 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d030357 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology