HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QOZ80_2AG0119720
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr2A 22398754 22400046 - gene-QOZ80_2AG0119720
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.12 48,211.26 Da 59.82 87.91 -0.18
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 9 52 1.6E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 8 71 8.37E-11 IPR036047
SMART SM00256 fbox_2 11 53 8.9E-5 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044360929.1 uncharacterized protein LOC123082729 [Triticum aestivum] 0
TrEMBL A0A5J9V5Y7 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_23018 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 CH01.3091
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_2AG0119720
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.