Basic Information
Locus ID:
gene-QOZ80_2AG0118150
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 17270946 | 17271563 | - | gene-QOZ80_2AG0118150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 21,989.13 Da | 39.48 | 85.46 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 58 | 120 | 1.66069E-10 | IPR002048 |
| CDD | cd00051 | EFh | 134 | 196 | 3.55893E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 132 | 195 | 3.7E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 58 | 119 | 1.2E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 48 | 196 | 1.17E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 126 | 202 | 4.5E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 29 | 125 | 4.1E-22 | - |
| SMART | SM00054 | efh_1 | 170 | 198 | 4.1E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 134 | 162 | 0.0014 | IPR002048 |
| SMART | SM00054 | efh_1 | 94 | 122 | 0.076 | IPR002048 |
| SMART | SM00054 | efh_1 | 58 | 86 | 8.0E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 54 | 89 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 130 | 165 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 90 | 125 | 10.022245 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 166 | 201 | 13.118635 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 103 | 115 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 67 | 79 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 179 | 191 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 143 | 155 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32250.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_004983552.1 | probable calcium-binding protein CML11 [Setaria italica] | 0 |
| Q9AWK2 | Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9STD2 | Calcium-binding protein CML11 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52327 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology