Basic Information
Locus ID:
gene-QOZ80_2AG0117420
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 16178373 | 16178822 | + | gene-QOZ80_2AG0117420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 16,353.35 Da | 38.88 | 79.40 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 46 | 144 | 7.9E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 46 | 144 | 3.53E-24 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 149 | 1.9E-27 | IPR011333 |
| SMART | SM00225 | BTB_4 | 47 | 147 | 4.5E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 47 | 113 | 17.375925 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039841770.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SH50 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56643 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0111710, gene-QOZ80_2AG0117420 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr14G006490, Chr18G008260, Chr18G008270, Chr18G008280 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-43920 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g15244 |