halophFGD

Basic Information

Locus ID: gene-QOZ80_2AG0116730

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description: Protein tyrosine kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2A	15179230	15181990	+	gene-QOZ80_2AG0116730

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.18	56,388.82 Da	41.69	96.58	-0.38

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	143	395	9.2E-39	IPR000719
Pfam	PF04564	U-box domain	426	493	2.4E-16	IPR003613
SUPERFAMILY	SSF57850	RING/U-box	412	494	3.62E-23	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	122	398	8.5E-66	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	113	212	2.0E-23	-
Gene3D	G3DSA:3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	423	496	3.0E-23	IPR013083
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	213	419	9.8E-49	-
SMART	SM00220	serkin_6	140	407	4.7E-24	IPR000719
SMART	SM00504	Ubox_2	428	490	8.7E-19	IPR003613
ProSiteProfiles	PS50011	Protein kinase domain profile.	140	407	34.294044	IPR000719
ProSiteProfiles	PS51698	U-box domain profile.	424	497	27.432281	IPR003613
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	258	270	-	IPR008271
Coils	Coil	Coil	55	96	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation) GO:0016567 (protein ubiquitination)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0004842 (ubiquitin-protein transferase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G61550.1	U-box domain-containing protein kinase family protein.
RefSeq	XP_021309392.1	U-box domain-containing protein 35 isoform X3 [Sorghum bicolor]
Swiss-Prot	Q9FKG6	U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1
TrEMBL	A0A804Q921	E3 ubiquitin ligase OS=Zea mays OX=4577 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg14128
Aizoaceae	Mesembryanthemum crystallinum	2	gene_3106, gene_3242
Amaranthaceae	Atriplex hortensis	1	Ah018189
Amaranthaceae	Beta vulgaris	2	BVRB_3g053450, BVRB_9g211010
Amaranthaceae	Salicornia bigelovii	9	Sbi_jg15303, Sbi_jg38442, Sbi_jg38443, Sbi_jg38444 ... Sbi_jg38445, Sbi_jg38446, Sbi_jg56120, Sbi_jg6550, Sbi_jg6553
Amaranthaceae	Salicornia europaea	4	Seu_jg15366, Seu_jg15367, Seu_jg15368, Seu_jg26596
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00006461, GOSA_00006462, GOSA_00006463, GOSA_00020211 ... GOSA_00020212
Amaranthaceae	Suaeda glauca	4	Sgl02210, Sgl07073, Sgl07108, Sgl07364
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000012294, gene:ENSEOMG00000029173 ... gene:ENSEOMG00000043906
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0003540, CQ.Regalona.r1.3AG0009060 ... CQ.Regalona.r1.3BG0003690, CQ.Regalona.r1.3BG0009480
Anacardiaceae	Pistacia vera	2	pistato.v30187550, pistato.v30187590
Apiaceae	Apium graveolens	2	Ag10G02693, Ag4G01789
Arecaceae	Cocos nucifera	2	COCNU_07G005170, COCNU_09G002320
Arecaceae	Phoenix dactylifera	2	gene-LOC103717300, gene-LOC103721159
Asparagaceae	Asparagus officinalis	1	AsparagusV1_04.3268.V1.1
Asteraceae	Flaveria trinervia	2	Ftri17G24353, Ftri6G25477
Brassicaceae	Arabidopsis thaliana	4	AT4G25160.1, AT5G51270.1, AT5G61550.2, AT5G61560.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10003692m.g.v1.0, Thhalv10005349m.g.v1.0 ... Thhalv10012716m.g.v1.0, Thhalv10024396m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp2g24750.v2.2, Sp2g24760.v2.2, Sp6g13460.v2.2 ... Sp7g23160.v2.2
Brassicaceae	Brassica nigra	13	BniB02g028540.2N, BniB02g028560.2N, BniB02g028630.2N ... BniB02g075730.2N, BniB02g081610.2N, BniB02g081640.2N, BniB04g002710.2N, BniB04g002720.2N, BniB04g002730.2N, BniB04g002740.2N, BniB05g012080.2N, BniB05g060180.2N, BniB07g041250.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G1163
Casuarinaceae	Casuarina glauca	1	Cgl03G1268
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno14g08330
Dunaliellaceae	Dunaliella salina	1	Dusal.0345s00020.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g20690
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG01.2380
Plantaginaceae	Plantago ovata	3	Pov_00012348, Pov_00029734, Pov_00040770
Plumbaginaceae	Limonium bicolor	1	Lb3G21169
Poaceae	Echinochloa crus-galli	6	AH01.2901, AH06.181, BH01.3240, BH06.282, CH01.3474 ... CH06.263
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0116730, gene-QOZ80_2BG0170410 ... gene-QOZ80_6AG0508120, gene-QOZ80_6BG0460310
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.4HG0416400.1, HORVU.MOREX.r3.6HG0541590.1 ... HORVU.MOREX.r3.7HG0648220.1
Poaceae	Lolium multiflorum	5	gene-QYE76_008916, gene-QYE76_027777, gene-QYE76_030583 ... gene-QYE76_071569, gene-QYE76_071887
Poaceae	Oryza coarctata	6	Oco05G000100, Oco06G000140, Oco11G001980, Oco12G001900 ... Oco19G010210, Oco20G010030
Poaceae	Oryza sativa	3	LOC_Os03g01160.2, LOC_Os06g04880.1, LOC_Os10g41220.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G285800, gene-BS78_10G030600
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0101057, Pt_Chr0101166, Pt_Chr0402257
Poaceae	Sporobolus alterniflorus	8	Chr06G027760, Chr09G004970, Chr0G015010, Chr11G023260 ... Chr13G019820, Chr14G001470, Chr15G018720, Chr21G000580
Poaceae	Thinopyrum elongatum	3	Tel4E01G608600, Tel6E01G059900, Tel7E01G177600
Poaceae	Triticum dicoccoides	7	gene_TRIDC4AG059360, gene_TRIDC4AG059380 ... gene_TRIDC4BG061810, gene_TRIDC5AG076800, gene_TRIDC6AG002220, gene_TRIDC6BG003070, gene_TRIDC7AG009520
Poaceae	Triticum aestivum	10	TraesCS4A02G382700.4, TraesCS4A02G382900.1 ... TraesCS4B02G371600.1, TraesCS4D02G365900.1, TraesCS5A02G542700.1, TraesCS6A02G018500.1, TraesCS6B02G027000.1, TraesCS6D02G022900.1, TraesCS7A02G084400.4, TraesCS7D02G079400.2
Poaceae	Zea mays	2	Zm00001eb312220_P004, Zm00001eb377470_P001
Poaceae	Zoysia japonica	2	nbis-gene-34673, nbis-gene-40371
Poaceae	Zoysia macrostachya	3	Zma_g15688, Zma_g29079, Zma_g31326
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.1433, evm.TU.LG01.805, evm.TU.LG06.1890 ... evm.TU.LG11.1482, evm.TU.LG14.716, evm.TU.LG23.202
Posidoniaceae	Posidonia oceanica	1	gene.Posoc06g13490
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_11_RagTag.1246
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-12437, nbisL1-mrna-12548
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-18619
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-12816
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000010l.286
Rhizophoraceae	Kandelia obovata	1	Maker00008769
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-575
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-8884
Salicaceae	Populus euphratica	1	populus_peu08177
Solanaceae	Lycium barbarum	1	gene-LOC132631680
Solanaceae	Solanum chilense	2	SOLCI006716300, SOLCI007312500
Solanaceae	Solanum pennellii	2	gene-LOC107012512, gene-LOC107019988
Tamaricaceae	Reaumuria soongarica	1	gene_4201
Tamaricaceae	Tamarix chinensis	1	TC06G2145
Zosteraceae	Zostera marina	2	Zosma01g31080.v3.1, Zosma05g30630.v3.1