Basic Information
Locus ID:
gene-QOZ80_2AG0115760
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 13980314 | 13984468 | - | gene-QOZ80_2AG0115760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 80,834.05 Da | 46.87 | 85.78 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 649 | 690 | 2.25944E-22 | - |
| CDD | cd01989 | STK_N | 38 | 190 | 2.49062E-47 | - |
| Pfam | PF00069 | Protein kinase domain | 361 | 562 | 5.7E-43 | IPR000719 |
| Pfam | PF04564 | U-box domain | 646 | 715 | 3.0E-18 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 622 | 1.35E-66 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 640 | 714 | 1.94E-23 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 39 | 181 | 2.01E-8 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 34 | 164 | 1.1E-8 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 630 | 1.1E-45 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 644 | 716 | 1.2E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 430 | 8.8E-29 | - |
| SMART | SM00504 | Ubox_2 | 648 | 711 | 1.8E-26 | IPR003613 |
| SMART | SM00220 | serkin_6 | 358 | 619 | 3.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 625 | 33.983097 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 644 | 716 | 34.385002 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 364 | 385 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 476 | 488 | - | IPR008271 |
| Coils | Coil | Coil | 272 | 334 | - | - |
| Coils | Coil | Coil | 103 | 123 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_025791425.1 | U-box domain-containing protein 33-like isoform X3 [Panicum hallii] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9SVC5 | E3 ubiquitin ligase OS=Eragrostis curvula OX=38414 GN=EJB05_51563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology