Basic Information
Locus ID:
gene-QOZ80_2AG0114350
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 12485420 | 12486898 | + | gene-QOZ80_2AG0114350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 56,096.64 Da | 53.83 | 89.19 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 45 | 1.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 52 | 1.02E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 178 | 440 | 3.66E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 51 | 1.1E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 171 | 449 | 1.2E-11 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 57 | 10.159829 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55660.1 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_044326337.1 | FBD-associated F-box protein At5g60610-like [Triticum aestivum] | 0 |
| Q9SZ44 | F-box protein At4g27050 OS=Arabidopsis thaliana OX=3702 GN=At4g27050 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UD67 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_30670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology