Basic Information
Locus ID:
gene-QOZ80_2AG0111710
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 9982893 | 9984407 | + | gene-QOZ80_2AG0111710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 56,658.87 Da | 38.26 | 90.02 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 125 | 2.04312E-17 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 142 | 243 | 1.7E-18 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 324 | 424 | 3.1E-21 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 325 | 424 | 3.53E-24 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 139 | 244 | 4.32E-21 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 4 | 132 | 1.21E-22 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 135 | 243 | 4.6E-24 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 315 | 424 | 5.5E-27 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 244 | 312 | 5.2E-10 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 425 | 493 | 2.5E-10 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 2 | 129 | 1.1E-18 | IPR008974 |
| SMART | SM00225 | BTB_4 | 143 | 244 | 6.7E-19 | IPR000210 |
| SMART | SM00225 | BTB_4 | 325 | 426 | 1.6E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 325 | 391 | 15.121588 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 143 | 201 | 12.412246 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1 | 125 | 13.384899 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_002467204.1 | BTB/POZ and MATH domain-containing protein 1 [Sorghum bicolor] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SH50 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56643 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0111710, gene-QOZ80_2AG0117420 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr14G006490, Chr18G008260, Chr18G008270, Chr18G008280 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-43920 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g15244 |