Basic Information
Locus ID:
gene-QOZ80_2AG0111690
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 9962351 | 9963391 | - | gene-QOZ80_2AG0111690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.55 | 38,723.46 Da | 35.24 | 87.11 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 33 | 145 | 1.69771E-21 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 166 | 266 | 2.0E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 153 | 3.92E-29 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 166 | 266 | 1.51E-25 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 148 | 5.1E-26 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 267 | 335 | 9.4E-10 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 149 | 263 | 1.2E-28 | IPR011333 |
| SMART | SM00225 | BTB_4 | 167 | 268 | 6.6E-25 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 15 | 145 | 15.046916 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 167 | 233 | 15.597273 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_004986481.2 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SFK7 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56645 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH01.1971 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0111690 |
| Poaceae | Paspalum vaginatum | 11 | gene-BS78_01G192700, gene-BS78_01G193000, gene-BS78_K188700 ... |