halophFGD

Basic Information

Locus ID: gene-QOZ80_2AG0111470

Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504

Genome Assembly: GCA_032690845.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2A	9774578	9775849	-	gene-QOZ80_2AG0111470

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.94	47,422.06 Da	44.17	92.17	-0.11

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	56	94	2.3E-4	IPR001810
SUPERFAMILY	SSF81383	F-box domain	56	108	1.7E-10	IPR036047
MobiDBLite	mobidb-lite	consensus disorder prediction	28	42	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	24	46	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_052144074.1	uncharacterized protein LOC127763420 [Oryza glaberrima]	0
TrEMBL	A0A6G1F6H1	F-box domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_010372 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	16	AH02.1784, AH07.1452, AH07.1901, AH07.1934, BH07.1147 ... BH07.1413, BH07.1435, BH07.1908, BH08.1369, CH07.1033, CH07.1126, CH07.1132, CH07.1145, CH07.1151, CH07.927, CH08.1785
Poaceae	Eleusine coracana subsp. coracana	27	gene-QOZ80_2AG0110190, gene-QOZ80_2AG0110220 ... gene-QOZ80_2AG0110280, gene-QOZ80_2AG0110360, gene-QOZ80_2AG0110370, gene-QOZ80_2AG0110390, gene-QOZ80_2AG0110400, gene-QOZ80_2AG0110410, gene-QOZ80_2AG0111460, gene-QOZ80_2AG0111470, gene-QOZ80_2AG0112350, gene-QOZ80_2AG0129810, gene-QOZ80_2BG0163700, gene-QOZ80_2BG0163770, gene-QOZ80_2BG0163790, gene-QOZ80_2BG0163830, gene-QOZ80_2BG0163840, gene-QOZ80_2BG0163850, gene-QOZ80_2BG0163860, gene-QOZ80_2BG0163870, gene-QOZ80_2BG0164930, gene-QOZ80_2BG0164940, gene-QOZ80_2BG0165720, gene-QOZ80_2BG0184810, gene-QOZ80_4AG0320630, gene-QOZ80_6AG0508590, gene-QOZ80_6AG0508610
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.3HG0314570.1.CDS1 ... HORVU.MOREX.r3.3HG0314590.1.CDS1, HORVU.MOREX.r3.3HG0314720.1.CDS1, HORVU.MOREX.r3.3HG0314740.1.CDS1
Poaceae	Lolium multiflorum	7	gene-QYE76_015261, gene-QYE76_015310, gene-QYE76_017079 ... gene-QYE76_041523, gene-QYE76_057756, gene-QYE76_057833, gene-QYE76_057908
Poaceae	Oryza coarctata	5	Oco03G007930, Oco03G008160, Oco04G008280, Oco04G008290 ... Oco07G002840
Poaceae	Oryza sativa	5	LOC_Os02g18630.1, LOC_Os02g18640.1, LOC_Os02g19200.1 ... LOC_Os04g24820.1, LOC_Os04g25840.1
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0505900, Pt_Chr0600724
Poaceae	Sporobolus alterniflorus	5	Chr06G031530, Chr06G031540, Chr0G015730, Chr13G012900 ... Chr14G001690
Poaceae	Thinopyrum elongatum	6	Tel1E01G687800, Tel3E01G732700, Tel3E01G733300 ... Tel3E01G735300, Tel3E01G735800, Tel3E01G736000
Poaceae	Triticum dicoccoides	6	gene_TRIDC3AG065160, gene_TRIDC3AG065250 ... gene_TRIDC3BG073870, gene_TRIDC3BG074090, gene_TRIDC3BG074110, gene_TRIDC3BG074120
Poaceae	Triticum aestivum	21	TraesCS1A02G415600.1, TraesCS3A02G461700.1 ... TraesCS3A02G461800.1, TraesCS3A02G462700.1, TraesCS3A02G463100.1.cds1, TraesCS3B02G504300.1, TraesCS3B02G504400.1.cds1, TraesCS3B02G504600.1.cds1, TraesCS3B02G505600.1.cds1, TraesCS3B02G505900.1.cds1, TraesCS3B02G506100.1.cds1, TraesCS3B02G506300.1.cds1, TraesCS3D02G455100.1, TraesCS3D02G455200.1.cds1, TraesCS3D02G455400.1.cds1, TraesCS3D02G456200.1, TraesCS3D02G456400.1.cds1, TraesCS3D02G456600.1, TraesCS3D02G456800.1.cds1, TraesCS3D02G457000.1.cds1, TraesCS3D02G457100.1
Poaceae	Zea mays	1	Zm00001eb240310_P001
Poaceae	Zoysia japonica	4	nbis-gene-16342, nbis-gene-34069, nbis-gene-45207 ... nbis-gene-57917
Poaceae	Zoysia macrostachya	4	Zma_g12618, Zma_g15259, Zma_g15303, Zma_g2662