HalophFGD

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Basic Information
Locus ID: gene-QOZ80_2AG0110240
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr2A 8737813 8739123 - gene-QOZ80_2AG0110240
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.64 48,529.66 Da 54.01 86.90 -0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 31 92 3.27E-5 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 1 20 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 15 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002447128.1 uncharacterized protein LOC8066812 [Sorghum bicolor] 0
TrEMBL A0A0A9VFK7 F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 BH07.1415, BH07.1425, CH07.1144
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_2AG0110170, gene-QOZ80_2AG0110240 ...
gene-QOZ80_2BG0163720
Poaceae Oryza coarctata 1 Oco04G008560
Poaceae Zoysia japonica 1 nbis-gene-48239
Poaceae Zoysia macrostachya 2 Zma_g17715, Zma_g17718
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.